Protein Alignment bcd and mnx1

DIOPT Version :10

• Sequence 1: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: XP_002935225.2
• Gene: mnx1 / 100496534
• XenbaseID: XB-GENE-919890
• Length: 338
• Species: Xenopus tropicalis
• Alignment Length: 350
• Identity: 78/350 - (22%)
• Similarity: 132/350 - (37%)
• Gaps: 101/350 - (28%)

  Fly     4 PPPDQNFYHHPLP---HTHTHP------HPHSHP---------HP------------HSHPHPHH 38
            |.|.:.....|.|   .:|.||      ||.:.|         ||            ..||...:
 Frog    55 PSPPRTCGLVPKPGFLSSHQHPINMMALHPQAAPGIPPQALYGHPMYSYSAAAALAAGQHPALSY 119

  Fly    39 QHPQLQLPPQFRNPFD-LLFDERTGAINYNYIRPYLPNQM-PKPDVFPSEELPDSLVMRRPRRTR 101
            .:||:|......:|.| :.....|..:: .::|......| ||...|.|:  ..|.::.:.||.|
 Frog   120 PYPQMQGAHHAHHPVDPIKISAGTFQLD-QWLRASTAGMMLPKMADFNSQ--AQSNLLGKCRRPR 181

  Fly   102 TTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQSYEG 166
            |.|||.|:.|||..|...:||:.|:..:::..|.|...||||||:|||.:.| :|.:.|:|:.:
 Frog   182 TAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWK-RSKKAKEQAVQ- 244

  Fly   167 MPLSPGMKQSDGDPPSLQTLSLGGGATPNALTPSPTPSTPTAHMTEHYSESFNAYYNYNGGHNHA 231
                        |....|....|          |.....|     |...|..|:|
 Frog   245 ------------DAEKQQRAGKG----------SCEEKCP-----EELQEDKNSY---------- 272

  Fly   232 QANRHMHMQYPSGGGPGPGSTNVNGGQFFQQQQVHNHQQQLHHQGNHVPHQMQQQQQQAQQQQYH 296
                |:|.:    |.|..|::.:          |.::......:......:.::::...::::::
 Frog   273 ----HLHPR----GDPIKGNSRL----------VRDYSDSEEEEDEEDREEEEEEEGHREEKRFY 319

  Fly   297 HFDFQQKQASACRVLVKDEPEADYN 321
            |      .:|.|   ..:|.|:.:|
 Frog   320 H------HSSDC---TSEEEESSHN 335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	20/46 (43%)
mnx1	XP_002935225.2	Homeodomain	178..234	CDD:459649	27/56 (48%)