DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and Hmx1

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001101833.2 Gene:Hmx1 / 360960 RGDID:1304928 Length:333 Species:Rattus norvegicus


Alignment Length:117 Identity:41/117 - (35%)
Similarity:59/117 - (50%) Gaps:8/117 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 KRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREP 155
            |::||.|:..|:.:||:.|....||....|..:|..|.|.|.||||||||||.|:|:.:....|.
  Rat   193 KKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKRQLAAELEA 257

  Fly   156 KSNAKLAQPQAEQSAHRGIVKRLMSYSQDPREGTAAAEKRPMMAVAPVNPKP 207
               |.|:.|.|::     :|:..:.|.:.|...|......|:...||..|.|
  Rat   258 ---ASLSPPGAQR-----LVRVPVLYHESPPAATGPTLPFPLAPPAPAPPPP 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 26/55 (47%)
Hmx1NP_001101833.2 Homeodomain 193..249 CDD:459649 26/55 (47%)

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