Protein Alignment zen and msx1a

DIOPT Version :10

• Sequence 1: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_571348.1
• Gene: msx1a / 30527
• ZFINID: ZDB-GENE-980526-312
• Length: 233
• Species: Danio rerio
• Alignment Length: 115
• Identity: 38/115 - (33%)
• Similarity: 53/115 - (46%)
• Gaps: 21/115 - (18%)

  Fly    53 NPTTLNDHCSPQHVHQQHVSSDENLPSQPNHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLYR 117
            :|:.|:....|...|:.:                    ::.||.|::.||:.||.:|:...||..
Zfish    94 SPSRLSPPACPLRKHKTN--------------------RKPRTPFSTAQLLALERKFRQKQYLSI 138

  Fly   118 TRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREP-KSNAKLAQPQA 166
            ..|.|.:..|||.|.||||||||||.|.|:..:...|. |..||...|.|
Zfish   139 AERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPLLPPA 188

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	27/55 (49%)
msx1a	NP_571348.1	Homeodomain	112..168	CDD:459649	27/55 (49%)