Protein Alignment zen and Hoxc12

DIOPT Version :10

• Sequence 1: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_001100266.1
• Gene: Hoxc12 / 300262
• RGDID: 1310539
• Length: 280
• Species: Rattus norvegicus
• Alignment Length: 75
• Identity: 35/75 - (46%)
• Similarity: 46/75 - (61%)
• Gaps: 4/75 - (5%)

  Fly    73 SDENLPSQPNHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIW 137
            |....|..|.|...|.|    |..::.:||.|||.||..|.::.|.||.|::.||:|.::|||||
  Rat   199 SASGAPWYPIHSRSRKK----RKPYSKLQLAELEGEFLVNEFITRQRRRELSDRLNLSDQQVKIW 259

  Fly   138 FQNRRMKFKK 147
            |||||||.|:
  Rat   260 FQNRRMKKKR 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	28/55 (51%)
Hoxc12	NP_001100266.1	Homeodomain	213..269	CDD:459649	30/59 (51%)