DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and barx2

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:XP_001342044.1 Gene:barx2 / 100002200 ZFINID:ZDB-GENE-081120-4 Length:268 Species:Danio rerio


Alignment Length:204 Identity:65/204 - (31%)
Similarity:94/204 - (46%) Gaps:47/204 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 NQMNSNPTTLND---HCSPQHVHQQHVSSDENLPSQPNHDSQRVKL-KRSRTAFTSVQLVELENE 108
            :|.:|:.:.|:.   |..|.......:||:    |...|.:.|:|. :||||.||.:||:.||.:
Zfish    77 HQASSSVSPLSQSSPHLPPSSETPLSISSE----SDTEHCTPRLKKPRRSRTIFTELQLLGLEKK 137

  Fly   109 FKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDI--QGHR-------EPKSN------ 158
            |:...||....|:::||.|.|.:.|||.|:||||||:||.:  .||.       .||.|      
Zfish   138 FQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGHEAPTKPKGRPKKNSIPTTE 202

  Fly   159 ---------AKLAQPQAEQSAHRGIVKRL-MSYSQD-PREGTAAAE----KRPMMAVAPVNPKPD 208
                     ||||:   |:..|..:...: .|..|| ....|:|.|    :.|....||.:|   
Zfish   203 EIEAQERMEAKLAE---EERLHAEVEDEVFQSQPQDLSTSATSAVEYVCPESPEREQAPASP--- 261

  Fly   209 YQASQKMKT 217
               |:.|.|
Zfish   262 ---SEAMTT 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 28/55 (51%)
barx2XP_001342044.1 Homeodomain 120..176 CDD:459649 28/55 (51%)

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