DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and hmx1

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001106998.1 Gene:hmx1 / 797503 ZFINID:ZDB-GENE-080204-54 Length:282 Species:Danio rerio


Alignment Length:144 Identity:41/144 - (28%)
Similarity:66/144 - (45%) Gaps:31/144 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 AAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRR 95
            :.|..:...|.:.|::||.||..|:.:||..|.:.:||:.:.|..::..|.|||.||||||||||
Zfish   138 SGPDTSEPGSARKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRR 202

  Fly    96 MKLKKSTNRKGAIGALTTSIPLSSQSSEDLQ------KDDQIVERLLRYANTNVETAPLRQVDHG 154
            .|.|:                   |.:.||:      ...:||...:.|.:   :..|:..:...
Zfish   203 NKWKR-------------------QLAADLEAVNFNHNSQRIVRVPILYHD---KATPMSTLSFN 245

  Fly   155 VLEEGQITPPYQSY 168
            |   .|::||...:
Zfish   246 V---SQVSPPLMGF 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 27/55 (49%)
hmx1NP_001106998.1 Homeodomain 151..207 CDD:459649 27/55 (49%)

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