DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and lbx1b

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001156784.1 Gene:lbx1b / 793810 ZFINID:ZDB-GENE-050309-27 Length:265 Species:Danio rerio


Alignment Length:143 Identity:44/143 - (30%)
Similarity:62/143 - (43%) Gaps:50/143 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLK---- 99
            |.:|.::|||||::.||.|||:.|...|||:...|.:|:.:|.||..||..||||||.|||    
Zfish   117 SPKKRRKSRTAFTNHQLYELEKRFLHQKYLSPADRDQIAHQLGLTNAQVITWFQNRRAKLKRDLE 181

  Fly   100 ---------KST--------------NRKGAIGA-----------------------LTTSIPLS 118
                     :||              .|..|.||                       |:....||
Zfish   182 EMKADVESVRSTGLVPLDKLAKLADLERCAAAGATGNPGPQCSPRLGHEYKTVHKLCLSPMSSLS 246

  Fly   119 SQSSEDLQKDDQI 131
            ..:|:|..:|:::
Zfish   247 DHTSQDCSEDEEV 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 30/68 (44%)
lbx1bNP_001156784.1 Homeodomain 122..178 CDD:459649 29/55 (53%)

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