DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and hoxc1a

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_571606.1 Gene:hoxc1a / 58046 ZFINID:ZDB-GENE-000822-2 Length:302 Species:Danio rerio


Alignment Length:95 Identity:51/95 - (53%)
Similarity:61/95 - (64%) Gaps:8/95 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RSSEK---SKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLK 99
            |.|::   |..|||.|::.||.|||:|||.||||.|.|||||:..|.|:|.||||||||||||.|
Zfish   207 RDSDEDTSSGGSRTNFTTKQLTELEKEFHFNKYLTRARRIEIANPLQLSETQVKIWFQNRRMKQK 271

  Fly   100 KSTNRKGAIGALTTSIPLSSQSSEDLQKDD 129
            |.. |:|    |...:.|.|...||.:|.|
Zfish   272 KML-REG----LAQGLMLISGCDEDSKKSD 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 37/55 (67%)
hoxc1aNP_571606.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..224 7/16 (44%)
Homeodomain 218..272 CDD:459649 37/53 (70%)

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