DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and nkx6.3

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001159612.1 Gene:nkx6.3 / 558978 ZFINID:ZDB-GENE-070810-7 Length:272 Species:Danio rerio


Alignment Length:117 Identity:38/117 - (32%)
Similarity:53/117 - (45%) Gaps:31/117 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNRKG 106
            |.|.:|..||..|:..||:.|...||||...|..::..|.:||.|||:||||||.|.:|.     
Zfish   150 KKKHTRPTFSGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK----- 209

  Fly   107 AIGALTTSIPLSSQSSE---------------------DLQKDDQIVERLLR 137
                 :.:.|.|:|:|.                     |...||:.:.:|||
Zfish   210 -----SATEPSSTQTSRGESAGDGSENEVEDEEYNKPLDPDTDDEKIRQLLR 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 26/55 (47%)
nkx6.3NP_001159612.1 Homeodomain 150..208 CDD:459649 27/57 (47%)

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