DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and Dbx2

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001418946.1 Gene:Dbx2 / 541457 RGDID:1359605 Length:377 Species:Rattus norvegicus


Alignment Length:169 Identity:54/169 - (31%)
Similarity:76/169 - (44%) Gaps:42/169 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 AAPTATTR-----------SSEKSKRS---RTAFSSLQLIELEREFHLNKYLARTRRIEISQRLA 81
            |:|||.:|           |:.|::|.   |..||..|...||:.|...||:::|.|.:::..|.
  Rat   200 ASPTAFSREEHGLPLLTQDSNSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRRKLAISLG 264

  Fly    82 LTERQVKIWFQNRRMKLKKS------TNR-------------KGAIG-------ALTTSIPLSSQ 120
            |.|.||||||||||||.:.|      :||             :.|.|       ....|.|.||.
  Rat   265 LKESQVKIWFQNRRMKWRNSKEKEVLSNRCLQEVSLQEDRLAQPAAGCPPQCPSVWEVSQPHSSP 329

  Fly   121 SSEDLQKDDQIVERLLRYANTNVETAPLRQVDHGVLEEG 159
            |..  ::..:.||||.:..:...|...||.|.:...|:|
  Rat   330 SWR--EESPESVERLSQENSGVPEAGSLRGVLYLCPEKG 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 27/58 (47%)
Dbx2NP_001418946.1 PHA03247 <39..186 CDD:223021
Homeodomain 229..283 CDD:459649 26/53 (49%)
Blue background indicates that the domain is not in the aligned region.

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