DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and gsx1

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001012251.1 Gene:gsx1 / 449875 ZFINID:ZDB-GENE-041008-135 Length:243 Species:Danio rerio


Alignment Length:133 Identity:56/133 - (42%)
Similarity:75/133 - (56%) Gaps:26/133 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 YSVSDLMMYPCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQ 78
            |.|.|...:.|:.:.      .::...:.|||.||||:|.||:||||||..|.||:|.|||||:.
Zfish   113 YPVPDPRQFHCISIE------NSSSQLQSSKRMRTAFTSTQLLELEREFTSNMYLSRLRRIEIAT 171

  Fly    79 RLALTERQVKIWFQNRRMKLKK----STNRKGAIGALTTS-------------IPLSSQSSEDLQ 126
            .|.|:|:||||||||||:|.||    .::|.||.....:|             :|:|..|||   
Zfish   172 YLNLSEKQVKIWFQNRRVKHKKEGKSGSHRTGAHNCKCSSSLSSARCSEEEDDLPMSPPSSE--- 233

  Fly   127 KDD 129
            |:|
Zfish   234 KED 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 38/55 (69%)
gsx1NP_001012251.1 Homeodomain 137..193 CDD:459649 38/55 (69%)

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