DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and abd-A

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster


Alignment Length:152 Identity:51/152 - (33%)
Similarity:74/152 - (48%) Gaps:34/152 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VSDLMMYP----------------CVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHL 64
            ::||..||                |.:.|   .|....|     :|.|..::..|.:|||:|||.
  Fly   363 IADLPRYPWMTLTDWMGSPFERVVCGDFN---GPNGCPR-----RRGRQTYTRFQTLELEKEFHF 419

  Fly    65 NKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDD 129
            |.||.|.|||||:..|.|||||:|||||||||||||.         |.....::.|:..|.::.:
  Fly   420 NHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE---------LRAVKEINEQARRDREEQE 475

  Fly   130 QI-VERLLRYANTNVETAPLRQ 150
            :: .:..::.|..|.:....:|
  Fly   476 KMKAQETMKSAQQNKQVQQQQQ 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 35/55 (64%)
abd-ANP_732176.1 Homeodomain 399..455 CDD:459649 35/55 (64%)
Abdominal-A 456..478 CDD:403567 3/30 (10%)

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