DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and Gsc

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001137762.2 Gene:Gsc / 33240 FlyBaseID:FBgn0010323 Length:473 Species:Drosophila melanogaster


Alignment Length:114 Identity:30/114 - (26%)
Similarity:47/114 - (41%) Gaps:29/114 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKK----- 100
            ::.:|.||.|:..||.:||..|....|.....|.:::.::.|.|.:|::||:|||.|.:|     
  Fly   338 KRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKREE 402

  Fly   101 ------------------STNRKGAI------GALTTSIPLSSQSSEDL 125
                              :||.....      |:||...|.|...|..|
  Fly   403 QERLRKLQEEQCGSTTNGTTNSSSGTTSSTGNGSLTVKCPGSDHYSAQL 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 20/55 (36%)
GscNP_001137762.2 Homeodomain 341..397 CDD:459649 20/55 (36%)

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