DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and Msx2

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_037114.2 Gene:Msx2 / 25483 RGDID:3116 Length:267 Species:Rattus norvegicus


Alignment Length:67 Identity:33/67 - (49%)
Similarity:44/67 - (65%) Gaps:0/67 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 TATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKL 98
            |.|.|..:.:::.||.|::.||:.|||:|...:||:...|.|.|..|.|||.||||||||||.|.
  Rat   133 TCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKA 197

  Fly    99 KK 100
            |:
  Rat   198 KR 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 29/55 (53%)
Msx2NP_037114.2 Homeodomain 143..199 CDD:459649 29/55 (53%)

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