Protein Alignment zen2 and Hoxc6

DIOPT Version :10

• Sequence 1: NP_476794.1
• Gene: zen2 / 40827
• FlyBaseID: FBgn0004054
• Length: 252
• Species: Drosophila melanogaster
• Sequence 2: XP_063119084.1
• Gene: Hoxc6 / 252885
• RGDID: 620626
• Length: 264
• Species: Rattus norvegicus
• Alignment Length: 157
• Identity: 54/157 - (34%)
• Similarity: 73/157 - (46%)
• Gaps: 45/157 - (28%)

  Fly    20 MMYPCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTE 84
            ::||.:: .:..:......:..:.||||||::..|::|||:|||.|:||.|.|||||:..|.|:|
  Rat   134 IVYPWMK-KIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSE 197

  Fly    85 RQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDDQIVERLLRYANTNVETAP-- 147
            ||:||||||||||.||..                                  |..||.|.:||
  Rat   198 RQIKIWFQNRRMKWKKDH----------------------------------RLPNTKVRSAPPA 228

  Fly   148 ------LRQVDHGVLEE--GQITPPYQ 166
                  |.....|..|:  ...|||.|
  Rat   229 GAAPSTLSAATPGTSEDHSQSATPPEQ 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen2	NP_476794.1	Homeodomain	44..100	CDD:459649	37/55 (67%)
Hoxc6	XP_063119084.1	None