DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and nob-1

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001369824.1 Gene:nob-1 / 176641 WormBaseID:WBGene00003779 Length:243 Species:Caenorhabditis elegans


Alignment Length:138 Identity:44/138 - (31%)
Similarity:62/138 - (44%) Gaps:24/138 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FVDNYSV-------SDLMMYPCVELNVEAAPTATTR----SSEKSKRSRTAFSSLQLIELEREFH 63
            |..|||:       ||:.:......:....|.|...    .|...|:.|..:...|:..||.|:.
 Worm   118 FTANYSIPSLDGNLSDITIPTTAGSSAATTPNAAMHLPWAISHDGKKKRQPYKKDQISRLEYEYS 182

  Fly    64 LNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKD 128
            :|:||...||.|:|.:|.|.|:|||:||||||||.||...|..  |......|::          
 Worm   183 VNQYLTNKRRSELSAQLMLDEKQVKVWFQNRRMKDKKLRQRHS--GPFPHGAPVT---------- 235

  Fly   129 DQIVERLL 136
             ..:|||:
 Worm   236 -PCIERLI 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 27/55 (49%)
nob-1NP_001369824.1 Homeodomain 163..219 CDD:459649 27/55 (49%)

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