DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and cog-1

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001022264.1 Gene:cog-1 / 175149 WormBaseID:WBGene00000584 Length:256 Species:Caenorhabditis elegans


Alignment Length:80 Identity:33/80 - (41%)
Similarity:47/80 - (58%) Gaps:3/80 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNRKG 106
            :.|:||..|:..|:.:|||:|...||||...|.:::|.|.::|.|||:||||||.|.:|......
 Worm   168 QKKQSRPTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKVWFQNRRTKWRKKEAADN 232

  Fly   107 AI---GALTTSIPLS 118
            |:   ||.....|.|
 Worm   233 ALVKRGASGDKSPCS 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 27/55 (49%)
cog-1NP_001022264.1 Homeodomain 170..226 CDD:459649 27/55 (49%)

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