DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and Hoxd8

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_032302.2 Gene:Hoxd8 / 15437 MGIID:96209 Length:289 Species:Mus musculus


Alignment Length:112 Identity:50/112 - (44%)
Similarity:61/112 - (54%) Gaps:18/112 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NYSVSDLMMYPCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEIS 77
            |.|.|...|:|.  :..:|||        ..:|.|..:|..|.:|||:||..|.||.|.||||:|
Mouse   175 NQSSSPSQMFPW--MRPQAAP--------GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVS 229

  Fly    78 QRLALTERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSED 124
            ..||||||||||||||||||.||..|:        ...|.|...::|
Mouse   230 HTLALTERQVKIWFQNRRMKWKKENNK--------DKFPASRPEAKD 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 36/55 (65%)
Hoxd8NP_032302.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..125
COG5576 139..272 CDD:227863 50/112 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..184 3/8 (38%)
Antp-type hexapeptide 183..188 2/6 (33%)
Homeodomain 196..252 CDD:459649 36/55 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 252..289 5/25 (20%)
Blue background indicates that the domain is not in the aligned region.

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