DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and Hoxc4

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_038581.2 Gene:Hoxc4 / 15423 MGIID:96195 Length:264 Species:Mus musculus


Alignment Length:157 Identity:54/157 - (34%)
Similarity:73/157 - (46%) Gaps:45/157 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 MMYPCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTE 84
            ::||.:: .:..:......:..:.||||||::..|::|||:|||.|:||.|.|||||:..|.|:|
Mouse   134 IVYPWMK-KIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSE 197

  Fly    85 RQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDDQIVERLLRYANTNVETAP-- 147
            ||:||||||||||.||..                                  |..||.|.:||  
Mouse   198 RQIKIWFQNRRMKWKKDH----------------------------------RLPNTKVRSAPPA 228

  Fly   148 ------LRQVDHGVLEE--GQITPPYQ 166
                  |.....|..|:  ...|||.|
Mouse   229 GAAPSTLSAATPGTSEDHSQSATPPEQ 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 37/55 (67%)
Hoxc4NP_038581.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..130
Antp-type hexapeptide 135..140 2/4 (50%)
Homeodomain 157..213 CDD:459649 37/55 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..264 13/76 (17%)
Blue background indicates that the domain is not in the aligned region.

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