DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and hoxa9

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:XP_031760007.1 Gene:hoxa9 / 116411596 XenbaseID:XB-GENE-481973 Length:261 Species:Xenopus tropicalis


Alignment Length:78 Identity:40/78 - (51%)
Similarity:51/78 - (65%) Gaps:3/78 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQV 87
            |.::.|..||.....||:.|   .|..::..|.:|||:||..|.||.|.||.|:::.|.||||||
 Frog   178 PPIDPNNPAANWLHARSTRK---KRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQV 239

  Fly    88 KIWFQNRRMKLKK 100
            ||||||||||:||
 Frog   240 KIWFQNRRMKMKK 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 31/55 (56%)
hoxa9XP_031760007.1 Hox9_act 1..182 CDD:461369 1/3 (33%)
Homeodomain 196..252 CDD:459649 32/58 (55%)

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