DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and Gbx2

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_446160.1 Gene:Gbx2 / 114500 RGDID:621866 Length:348 Species:Rattus norvegicus


Alignment Length:123 Identity:51/123 - (41%)
Similarity:69/123 - (56%) Gaps:21/123 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FAIQSENYFVDNYSVSDLMMYPCVELNVEAAP-------------TATTRSSEKSKRSRTAFSSL 53
            |:::|:   || ||..|.:  |....:.|..|             ..:|.|:.|::|.||||:|.
  Rat   199 FSLESD---VD-YSSDDNL--PGQTAHKEEDPGHALEETPQSGGAAGSTTSTGKNRRRRTAFTSE 257

  Fly    54 QLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLK--KSTNRKGAIG 109
            ||:|||:|||..|||:.|.|.:|:..|.|:|.||||||||||.|.|  |:.|.....|
  Rat   258 QLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAGNANSKTG 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 35/57 (61%)
Gbx2NP_446160.1 Homeodomain 248..304 CDD:459649 34/55 (62%)

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