DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and nkx3-3

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:XP_002937227.1 Gene:nkx3-3 / 100485176 XenbaseID:XB-GENE-479908 Length:241 Species:Xenopus tropicalis


Alignment Length:159 Identity:55/159 - (34%)
Similarity:71/159 - (44%) Gaps:37/159 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EAAPTA--TTRSS---------EKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALT 83
            |||.|.  |..||         ...||||.|||..|:.||||.|.|.:||:...|.:::..|.||
 Frog    93 EAASTGAYTDPSSGDLLGDSPKSSKKRSRAAFSHAQVYELERRFSLQRYLSGPERADLAAALKLT 157

  Fly    84 ERQVKIWFQNRRMKLKK-----STNRKGAIGALTTSIPLSSQSSEDLQKDDQIVERLLRYANTNV 143
            |.||||||||||.|.|:     .|..|.::.      |....:...|.||||     .:|...::
 Frog   158 ETQVKIWFQNRRYKTKRKLIATQTAPKSSLA------PARKVAVRVLVKDDQ-----RQYCPEDI 211

  Fly   144 ETAPLRQVDHGVLEEGQITPPYQSYDYLH 172
            ....|..:.|.          ||.|.|::
 Frog   212 LNPSLLSLYHA----------YQYYPYMY 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 32/55 (58%)
nkx3-3XP_002937227.1 Homeodomain 118..174 CDD:459649 32/55 (58%)

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