DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and hoxd8

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001135589.1 Gene:hoxd8 / 100216142 XenbaseID:XB-GENE-920113 Length:231 Species:Xenopus tropicalis


Alignment Length:104 Identity:45/104 - (43%)
Similarity:58/104 - (55%) Gaps:18/104 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 MYPCVELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTER 85
            |:|.  :..:.||        ..:|.|..:|..|.:|||:||..|.||.|.||||:|..|.||||
 Frog   127 MFPW--MRAQVAP--------GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTER 181

  Fly    86 QVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSED 124
            ||||||||||||.||..::        ...|:|||..::
 Frog   182 QVKIWFQNRRMKWKKENSK--------DKFPVSSQEGKE 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 35/55 (64%)
hoxd8NP_001135589.1 Homeodomain 140..196 CDD:459649 35/55 (64%)

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