DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zen2 and ventx3.2

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001123388.1 Gene:ventx3.2 / 100170150 XenbaseID:XB-GENE-483077 Length:282 Species:Xenopus tropicalis


Alignment Length:196 Identity:52/196 - (26%)
Similarity:82/196 - (41%) Gaps:51/196 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VELNVEAAP----TATTRSSEKSK---------RSRTAFSSLQLIELEREFHLNKYLARTRRIEI 76
            :|::.|::.    ...|.:::|:|         |:||.|::.||.|||:.|..|:|:..:.:..:
 Frog    98 IEVSAESSTDQRVIGMTDTNKKTKSVCDEDAASRARTKFTAEQLEELEKSFKENRYIGSSEKRRL 162

  Fly    77 SQRLALTERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDDQIVERLLRYANT 141
            |:.|.|:|.|:|.||||||||.|:.| :...:.|..:.:.|......||.               
 Frog   163 SKVLKLSENQIKTWFQNRRMKFKRQT-QDARVEAFFSGLYLPYYGYPDLP--------------- 211

  Fly   142 NVETAPLRQVDHGVLEEGQITPPYQSYDYLHEFSPEPMALPQLPFNEFDANWASSWLGLEPTIPI 206
                                ||.|.........:|:.||...:||....:...|.  ||.|.||.
 Frog   212 --------------------TPGYSVQSEFPVLAPQTMAASSIPFGPLHSTVMSP--GLHPAIPS 254

  Fly   207 A 207
            |
 Frog   255 A 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 27/64 (42%)
ventx3.2NP_001123388.1 Homeodomain 131..186 CDD:459649 26/54 (48%)

Return to query results.
Submit another query.