DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zen2 and nkx2-5

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001116891.1 Gene:nkx2-5 / 100144646 XenbaseID:XB-GENE-487966 Length:300 Species:Xenopus tropicalis


Alignment Length:257 Identity:64/257 - (24%)
Similarity:96/257 - (37%) Gaps:73/257 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NYFVDNYSVSDLMMYP-------C-----VELNVEAAPTATTRSSEKSKRSRTAFSSLQLIELER 60
            ::||.||...|....|       |     :|.:...|.........|.::.|..||..|:.||||
 Frog    78 SFFVKNYLEMDSSKDPKDDKKDICPLQKTLEHDKREAEDPERPRQRKRRKPRVLFSQAQVYELER 142

  Fly    61 EFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDL 125
            .|...|||:...|..::..|.||..||||||||||.|.|:                         
 Frog   143 RFKQQKYLSAPERDHLANVLKLTSTQVKIWFQNRRYKCKR------------------------- 182

  Fly   126 QKDDQIVERLLRYANTNVETAPLRQVDHGVL-EEGQ----ITPPYQSYDYLHEFSPEPMALPQLP 185
            |:.||.:|.        |...|.|::...|| .:|:    .:.||.        ||..:::....
 Frog   183 QRQDQTLEM--------VGLPPPRRIAVPVLVRDGKPCLGESSPYN--------SPYNVSINPYS 231

  Fly   186 FNEFDA--NWA------------SSWLGLEPTIPIAENVIEHNTQDQPMIQNFCWDSNSSSA 233
            :|.:.|  |::            ||...::|| ....|.:..:..|...:|.....::..||
 Frog   232 YNTYPAYSNYSNPACSGSYNCSYSSMPSMQPT-SAGNNFMNFSVGDLNTVQTPIQQASGVSA 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 27/55 (49%)
nkx2-5NP_001116891.1 Homeodomain 132..182 CDD:459649 26/49 (53%)
COG5576 <133..235 CDD:227863 41/142 (29%)

Return to query results.
Submit another query.