DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen2 and nkx6-2

DIOPT Version :10

Sequence 1:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster
Sequence 2:XP_002937836.1 Gene:nkx6-2 / 100038084 XenbaseID:XB-GENE-484527 Length:281 Species:Xenopus tropicalis


Alignment Length:116 Identity:42/116 - (36%)
Similarity:60/116 - (51%) Gaps:14/116 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKK-----S 101
            |.|.||..||..|:..||:.|...||||...|..::..|.:||.|||:||||||.|.:|     .
 Frog   153 KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEM 217

  Fly   102 TNRKGAIGALTTSIPLSSQSSEDLQ--------KDDQIVERLL-RYANTNV 143
            ...|....:.|..:..||::.||.:        .||:.:.||| ::.:||:
 Frog   218 ATAKKKHDSETEKMKESSENEEDDEYNKPLDPNSDDEKISRLLKKHKSTNL 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 27/55 (49%)
nkx6-2XP_002937836.1 Homeodomain 153..211 CDD:459649 28/57 (49%)

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