Protein Alignment pb and lbx1a

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001020703.1
• Gene: lbx1a / 564103
• ZFINID: ZDB-GENE-040724-40
• Length: 269
• Species: Danio rerio
• Alignment Length: 296
• Identity: 73/296 - (24%)
• Similarity: 111/296 - (37%)
• Gaps: 91/296 - (30%)

  Fly    84 KRS---ADTAYWMTASEGGFINSQPSMAEFLNH---LSPESPKIG-TPVGSGAIGGVGVNVNVNV 141
            |||   ..||:.:::.|     ..||....|::   |:..||... ..:.|....|:.|:
Zfish    48 KRSYTICGTAHLLSSGE-----KHPSTGHPLSNRALLTQTSPLCALEELASKTFKGLEVS----- 102

  Fly   142 GVGVGYPVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYT 206
                      |.|..:|.|.:..:......|..|||                        |||:|
Zfish   103 ----------VLQAAEGRDGMTLFGQRNTPKKRRKS------------------------RTAFT 133

  Fly   207 NTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLK 271
            |.|:.||||.|.:.|||....|.:||..|.||..||..||||||.|.||          :.:.:|
Zfish   134 NHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKR----------DLEEMK 188

  Fly   272 GDDDQSDSNSN--SKKSCQGCELP---SDDIPDSTSNSRGHNNNTPSATNNNPSAGNLTPNSSLE 331
            .|.:.:.:..|  .:|..:..:|.   :..:.||::.|...:|:....||..    :::|:|..
Zfish   189 ADVESAKAVGNVPFEKMAKLADLEKRVNGTLGDSSAVSPSRSNHEHEGTNKL----HMSPSSPY- 248

  Fly   332 TGISSNLMGSTTVSASNVISADSSVASSVSLDEDIE 367
                                .|.:.:...|.|||.|
Zfish   249 --------------------TDHTTSKECSEDEDEE 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	29/55 (53%)
lbx1a	NP_001020703.1	Homeodomain	126..182	CDD:459649	32/79 (41%)