DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and NKX1-1

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_001277008.1 Gene:NKX1-1 / 54729 HGNCID:24975 Length:448 Species:Homo sapiens


Alignment Length:273 Identity:71/273 - (26%)
Similarity:101/273 - (36%) Gaps:68/273 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SESPLNPLQVQTGQ----TSLPVGGCGGAGVVGGVGGVGVSVGQP------------GIGQQGVP 67
            :.:|..|....:|:    ..|......|||.||..|....:.|.|            |....|..
Human   115 ASAPCAPAPAASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGG 179

  Fly    68 PVPSVLMVNKMTPNCDKRSADTAYWMTASEG-------------------GFINSQPSMAEFLNH 113
            ..||....::: |:.:....|.|....|:.|                   |...:..|....::.
Human   180 HSPSADSGDEV-PDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDE 243

  Fly   114 LSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVPEYPWMKEKKTSRKSS 178
            .:...|:..:||..|..||...             .|....||.|..:..:   .|.|:|...| 
Human   244 AAAPGPRENSPVAQGPPGGAAA-------------PGGAGTTPQGTATAAK---PKRKRTGSDS- 291

  Fly   179 NNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVK 243
                           ::|.|||.|||:|..||:.||.:|...:||....|:.:|.||.|||.|||
Human   292 ---------------KSGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVK 341

  Fly   244 VWFQNRRMKHKRQ 256
            :||||||.|.|:|
Human   342 IWFQNRRTKWKKQ 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 30/55 (55%)
NKX1-1NP_001277008.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..80
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 115..299 40/216 (19%)
Homeodomain 297..353 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..397 3/5 (60%)
Blue background indicates that the domain is not in the aligned region.

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