Protein Alignment pb and Dlx6

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001414318.1
• Gene: Dlx6 / 500023
• RGDID: 1561539
• Length: 298
• Species: Rattus norvegicus
• Alignment Length: 215
• Identity: 60/215 - (27%)
• Similarity: 87/215 - (40%)
• Gaps: 53/215 - (24%)

  Fly   122 GTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVPEYPWMKEKKTS-------RKSSN 179
            |:|..||  ||...|..                      |:..||:|...:.|       ..|:.
  Rat   102 GSPYASG--GGNSYNHR----------------------SLAAYPYMSHSQHSPYLQSYHNSSAA 142

  Fly   180 NNNQGDNSITE--FVPENG---------LPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAA 233
            ...:||::..:  .|.|||         ..|:.||.|::.||..|...|...:||..|.|.|:||
  Rat   143 AQTRGDDTDQQKTTVIENGEIRFNGKGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAA 207

  Fly   234 SLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNS------NSKKSCQGCEL 292
            ||.||:.|||:||||:|.|.|: .|.:..:....|.|.|....|..:.      :...|.:|..:
  Rat   208 SLGLTQTQVKIWFQNKRSKFKK-LLKQGSNPHESDPLPGSAALSPRSPALPPVWDVSASAKGVSM 271

  Fly   293 PSDDIPDSTSNSRGHNNNTP 312
            |    |:|......|..::|
  Rat   272 P----PNSYMPGYSHWYSSP 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	28/55 (51%)
Dlx6	NP_001414318.1	None