Protein Alignment pb and Hoxb5

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001178854.1
• Gene: Hoxb5 / 497987
• RGDID: 1562292
• Length: 269
• Species: Rattus norvegicus
• Alignment Length: 121
• Identity: 53/121 - (43%)
• Similarity: 68/121 - (56%)
• Gaps: 28/121 - (23%)

  Fly   148 PVGVVPQTPDGMDSVPE-YPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLL 211
            |:......|:|  ..|: :|||::...|...:.             |:.   :|.|||||..|.|
  Rat   161 PMATSTAAPEG--QTPQIFPWMRKLHISHDMTG-------------PDG---KRARTAYTRYQTL 207

  Fly   212 ELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNK 267
            |||||||||:||.|.||||||.:|.|:|||:|:||||||||.|:         |||
  Rat   208 ELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK---------DNK 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	40/55 (73%)
Hoxb5	NP_001178854.1	PRK07003	<67..>171	CDD:235906	2/9 (22%)
		Homeodomain	195..251	CDD:459649	40/55 (73%)