Protein Alignment pb and Hoxb6

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001385781.1
• Gene: Hoxb6 / 497986
• RGDID: 1562142
• Length: 224
• Species: Rattus norvegicus
• Alignment Length: 212
• Identity: 69/212 - (32%)
• Similarity: 90/212 - (42%)
• Gaps: 64/212 - (30%)

  Fly    80 PNCDKRSADTAYWMTASEGGFINSQP-------------------SMAEFLNHLSPESPKIGTPV 125
            |..||..|.::|:..|. ||:..:.|                   |.|:......||..|.....
  Rat    47 PGQDKGFAASSYYPPAG-GGYGRAAPCDYGPAPAFYREKDAACALSGADEPPPFHPEPRKSDCAQ 110

  Fly   126 GSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITE 190
            .....|                      :|.:...|.|.||||:...:...||
  Rat   111 DKSVFG----------------------ETEEQKCSTPVYPWMQRMNSCNSSS------------ 141

  Fly   191 FVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR 255
            |.|..   ||.|..||..|.||||||||:|:||.|.||||||.:|.|||||:|:||||||||.|:
  Rat   142 FGPSG---RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 203

  Fly   256 QT-------LSKTDDED 265
            ::       ||..::|:
  Rat   204 ESKLLSASQLSAEEEEE 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	39/55 (71%)
Hoxb6	NP_001385781.1	Homeodomain	147..203	CDD:459649	39/55 (71%)