Protein Alignment pb and Abd-B

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Alignment Length: 243
• Identity: 68/243 - (27%)
• Similarity: 101/243 - (41%)
• Gaps: 75/243 - (30%)

  Fly    80 PNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPESPKIGTPVG-----------SGAIGGV 133
            |:....:|..|.:|..:|.....:.....|..:..|.|.|...:|.|           |||.||:
  Fly   300 PDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTYSSPGGLRGYPSENYSSSGASGGL 364

  Fly   134 GVNVNVNVGVGVGYPVGVVPQTPD-GMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGL 197
            .|.             .|.|.||: |:     :.|               .|..|:
  Fly   365 SVG-------------AVGPCTPNPGL-----HEW---------------TGQVSV--------- 387

  Fly   198 PRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTD 262
             |:.|..|:..|.|||||||.||.|:.:.:|.|:|.:|.|||||||:||||||||:|:.:..:.:
  Fly   388 -RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQAN 451

  Fly   263 DEDNKDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNN 310
            .::|       ::.|.||.|..::.|             .:..||:.|
  Fly   452 QQNN-------NNNSSSNHNHAQATQ-------------QHHSGHHLN 479

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	33/55 (60%)
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	33/55 (60%)