DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and H2.0

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster


Alignment Length:77 Identity:18/77 - (23%)
Similarity:26/77 - (33%) Gaps:21/77 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 KFGC------ALFRQFLKKEFSDENMDFWLECE----EFKKMKDGKKSTTQKAIEIYSEFVAEHS 249
            :|.|      .:||.||:|....::....:.||    .||..:|.|....|           ...
  Fly   265 RFQCDQCPKTFVFRCFLEKHIKTDHQHERVSCELCGKAFKYGQDLKVHMLQ-----------HED 318

  Fly   250 PKEVNLDSDTRA 261
            ||....|..:.|
  Fly   319 PKPYKCDQCSSA 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 14/59 (24%)
H2.0NP_523488.2 Homeodomain 292..352 CDD:459649 11/50 (22%)

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