Protein Alignment pb and pdx1

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_571518.2
• Gene: pdx1 / 30721
• ZFINID: ZDB-GENE-990415-122
• Length: 246
• Species: Danio rerio
• Alignment Length: 242
• Identity: 78/242 - (32%)
• Similarity: 109/242 - (45%)
• Gaps: 69/242 - (28%)

  Fly    68 PVPSVLMVNKMTPNCDKRSADTAYWMTASEGGFINSQPSMAEFLNH-LSPE----SPKIGTPVGS 127
            |.|.:.|          |.|.:.|   ||..| ...||::.:..:: :|..    .|.:..|..|
Zfish    32 PPPCLYM----------RQAHSVY---ASPLG-AQDQPNLTDITSYNMSSRDDLAGPHLHLPQTS 82

  Fly   128 ----GAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVPE-------YPWMKEKKTSRKSSNNN 181
                .::||.|                      |.:|...:       :||||..|:...:....
Zfish    83 QTSLQSLGGYG----------------------DSLDLCGDRNRYHLPFPWMKSTKSHTHAWKGQ 125

  Fly   182 NQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWF 246
            ..|...:.  ..||   :|.|||||..|||||||||.||||:.||||:|:|.:|.||||.:|:||
Zfish   126 WTGPYMVE--AEEN---KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELALTLSLTERHIKIWF 185

  Fly   247 QNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNS----KKSCQG 289
            ||||||.|:        |::|...:|.|.:.||:..|    .:||.|
Zfish   186 QNRRMKWKK--------EEDKRRARGVDPEQDSSITSGDLKDESCVG 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	39/55 (71%)
pdx1	NP_571518.2	Homeodomain	138..194	CDD:459649	39/55 (71%)