DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pb and Dlx5

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_034186.2 Gene:Dlx5 / 13395 MGIID:101926 Length:289 Species:Mus musculus


Alignment Length:308 Identity:78/308 - (25%)
Similarity:129/308 - (41%) Gaps:68/308 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 GIGQQGVP---------PVPSVLMV---NKMTPNCDKRSA-DTAYWMTASEGGFINSQPSMAEFL 111
            |:..:.||         |.|:...:   ::.:|...:.|| |:.|:           .|:.|...
Mouse     3 GVFDRRVPSIRSGDFQAPFPTSAAMHHPSQESPTLPESSATDSDYY-----------SPAGAAPH 56

  Fly   112 NHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVPEY----PWMKEKK 172
            .:.||.|...|..:........|||     |...|||.          .:..:|    |:.:...
Mouse    57 GYCSPTSASYGKALNPYQYQYHGVN-----GSAAGYPA----------KAYADYGYASPYHQYGG 106

  Fly   173 TSRKSSNNNNQGDNSITEFVPE----NGLPRRL---RTAYTNTQLLELEKEFHFNKYLCRPRRIE 230
            ...:..:..:|.:..:.|  ||    ||.|:::   ||.|::.||..|::.|...:||..|.|.|
Mouse   107 AYNRVPSATSQPEKEVAE--PEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAE 169

  Fly   231 IAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPSD 295
            :||||.||:.|||:||||:|.|.|:  :.|..:...:.|         .:|:...:|...:.|:.
Mouse   170 LAASLGLTQTQVKIWFQNKRSKIKK--IMKNGEMPPEHS---------PSSSDPMACNSPQSPAV 223

  Fly   296 DIPDSTSNSRGHNNNTPSATNNNPSAGNLTPNS-----SLETGISSNL 338
            ..|..:|.|..|:.:....|:|...|.:...||     |..:.|:|:|
Mouse   224 WEPQGSSRSLSHHPHAHPPTSNQSPASSYLENSASWYPSAASSINSHL 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 27/58 (47%)
Dlx5NP_034186.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49 10/56 (18%)
DLL_N 32..118 CDD:463567 20/111 (18%)
Homeodomain 138..194 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..253 11/63 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 270..289 1/2 (50%)

Return to query results.
Submit another query.