DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pb and LOC1281689

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:XP_321639.6 Gene:LOC1281689 / 1281689 VectorBaseID:AGAMI1_013275 Length:436 Species:Anopheles gambiae


Alignment Length:246 Identity:61/246 - (24%)
Similarity:83/246 - (33%) Gaps:79/246 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 GAGVVGGVGGVGV--SVGQPGIGQQGVPPVPSVLMVNKMTPNCDKRSADTAYWMTASEGGF---- 100
            |:.|..|.||:.:  ..|..|:...|.....||          ||:         ...||.    
Mosquito   155 GSNVELGFGGLNIEGESGTSGLTNPGAAAATSV----------DKK---------VHHGGVKDRF 200

  Fly   101 -------INSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDG 158
                   :||..|.|        :|.:...|.||                         |.:|..
Mosquito   201 LMSNLLQLNSTSSTA--------DSSRTMMPPGS-------------------------PSSPVD 232

  Fly   159 MDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYL 223
            .|.:.:.|..|...:.|..|....:              |||.||.:|..||..|||.|....|.
Mosquito   233 KDDLEDTPTHKSDLSMRTKSCTLKK--------------PRRNRTTFTTNQLTALEKIFEKTHYP 283

  Fly   224 CRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDD 274
            ....|.|:|..:.|:|.:|:|||||||.|.:|...|.........:.||:|
Mosquito   284 DAFVREELANKVGLSEARVQVWFQNRRAKFRRNERSAQSSGGGGSASKGED 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 26/55 (47%)
LOC1281689XP_321639.6 None

Return to query results.
Submit another query.