DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and LOC1281556

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:XP_061500013.1 Gene:LOC1281556 / 1281556 VectorBaseID:AGAMI1_000208 Length:433 Species:Anopheles gambiae


Alignment Length:434 Identity:103/434 - (23%)
Similarity:141/434 - (32%) Gaps:162/434 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLDTTSMGTQIKSESPLNPLQVQTGQTSLPVGGCGGAGVVGGVGGVGVSVGQPGIGQQGVPPVPS 71
            |:|:....|..|  ||.:|....|.|....:|        |||||.|.:| .||.|.....|.|.
Mosquito    30 SIDSIVGNTTPK--SPPSPPHTITKQGDTTIG--------GGVGGAGGAV-PPGSGPGVRTPSPL 83

  Fly    72 V-----LMVNKMTPNCDKRSADTAYWMT-------ASEGGFINSQPSMAEFLNHLSP-------- 116
            .     :.:|::    ...|....|.:|       :.||... |..|:....:.|||        
Mosquito    84 ASESYSVRLNRL----QSLSPPHNYSITRLPESPQSLEGSHA-SVRSLEALQSRLSPPVSHTVSP 143

  Fly   117 ------------ESPKIGTPVGSGAIGGVGVNVNVNVGVG---VGYPVG--VVPQTPDGM----- 159
                        .||.:..|....|.|.||:......|.|   ..:|.|  |||..|.|:     
Mosquito   144 GAVPLSLKRPRSSSPPVSPPPPPPATGVVGLGGGPQGGGGPVPPAHPAGPIVVPGLPPGLVRPFP 208

  Fly   160 ----------------------------------------------------------------- 159
                                                                             
Mosquito   209 VSPSQHAPGAHPAQPGGPQPELKSLPPFLHTPEMVQAAHNQHFLAAQFQAAALAHAQAGQPFPPH 273

  Fly   160 --------------DSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGL-----PRRLRTAY 205
                          ||.|.|||:..:           .|........|.|.|     .:|:|||:
Mosquito   274 PAAAHLHNPNMPPRDSYPLYPWLLSR-----------HGRGVFPIGFPGNYLIPFRKSKRVRTAF 327

  Fly   206 TNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSL 270
            :.:|||:||..|..|.|:....|.::|.:|:|:|.||||||||||.||||....:......|.: 
Mosquito   328 SPSQLLKLEHAFESNHYVVGAERKQLAQNLNLSETQVKVWFQNRRTKHKRMQQEEGGSGSGKST- 391

  Fly   271 KGDDDQSDSNSNSKKSCQGCE-----LPSDDIPDSTSNSRGHNN 309
             ..|.|:.|.|:...||...:     :..||.|....|.  |:|
Mosquito   392 -DGDHQNRSASSPTGSCDEEDDEDEFIDMDDCPSDEENM--HHN 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 29/55 (53%)
LOC1281556XP_061500013.1 None

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