DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and LOC1281555

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:XP_061500014.1 Gene:LOC1281555 / 1281555 VectorBaseID:AGAMI1_001228 Length:423 Species:Anopheles gambiae


Alignment Length:256 Identity:75/256 - (29%)
Similarity:96/256 - (37%) Gaps:83/256 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PGIGQQGVPPVPSVLMVNKMTPNCDK----------RSADTAYWMTASEGGFINSQPSMAEFLNH 113
            |||....|.|.|       |.||.|.          .||.......|....|:.:|...|  |.|
Mosquito   201 PGIPAGLVRPFP-------MAPNGDPLKPMPPFMGGNSAAELAVQAAHNQQFLAAQFQAA--LAH 256

  Fly   114 LSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGM--DSVPEYPWMKEKKTSRK 176
            :            .|..||.|           |:|.. :...|..|  :|.|.|||:..:     
Mosquito   257 V------------HGQHGGFG-----------GHPAH-LHNHPANMPRESYPLYPWLLSR----- 292

  Fly   177 SSNNNNQGDNSITEFVPENGL-----PRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLD 236
                  .|.|......|.:.|     |:|:|||::.:|||:||..|..|.|:....|..:|.||.
Mosquito   293 ------HGRNVFPPRFPGSYLLPFRKPKRVRTAFSPSQLLKLEHAFENNHYVVGAERKSLAQSLS 351

  Fly   237 LTERQVKVWFQNRRMKHKRQTLS----------------------KTDDEDNKDSLKGDDD 275
            |||.||||||||||.||||....                      :.||||....::.||:
Mosquito   352 LTETQVKVWFQNRRTKHKRMQQEEDAKSNGGSGEGGRDGRHSPGYEEDDEDELIDMEMDDE 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 31/55 (56%)
LOC1281555XP_061500014.1 None

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