Protein Alignment pb and LOC1272724

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_311623.3
• Gene: LOC1272724 / 1272724
• VectorBaseID: AGAMI1_000064
• Length: 327
• Species: Anopheles gambiae
• Alignment Length: 290
• Identity: 87/290 - (30%)
• Similarity: 117/290 - (40%)
• Gaps: 79/290 - (27%)

  Fly    15 TQIKSESPLNP------LQVQTGQTSLPVGGCGGAGVVGG------------------------V 49
            |:...|||.:.      .|:..|..|..  .||..|..|.                        .
Mosquito    60 TRTAQESPYDASIQAACKQIYEGSYSSK--DCGTKGTSGNNGTDTSNGYKDVWNANSGATNGATT 122

  Fly    50 GGVGVSVGQPGIGQQGVPPVPSVLMVNKMTPNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHL 114
            |..|.:|  |......||..||.     .||  |.|           .||:|::..
Mosquito   123 GATGSNV--PAQQNSSVPVRPSA-----CTP--DSR-----------VGGYIDASG--------- 158

  Fly   115 SPESPKIGTPV----GSGAIGGVGVNVNVNVGVGVGYPVG-VVPQTPDGMDSVPEYPWMKEKKTS 174
                   |:||    .:.|..||..:.|.|.....|...| ..|.|.....:...||||   ..:
Mosquito   159 -------GSPVSRAGSAAAAAGVPGSWNTNQCSLTGSTGGQAAPSTGLHQSNHTFYPWM---AIA 213

  Fly   175 RKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTE 239
            .|..:.:..| ..:.:::..|||.||.|..||..|.||||||||.|.||.|.||||:|.:|.|||
Mosquito   214 GKRYSESLAG-TLLPDWIGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTE 277

  Fly   240 RQVKVWFQNRRMKHKR--QTLSKTDDEDNK 267
            ||:|:||||||||.|:  |.:.:.::::.:
Mosquito   278 RQIKIWFQNRRMKLKKEIQAIKELNEQEKQ 307

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	38/55 (69%)
LOC1272724	XP_311623.3	None