DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and LOC1272715

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:XP_061500303.1 Gene:LOC1272715 / 1272715 VectorBaseID:AGAMI1_000880 Length:433 Species:Anopheles gambiae


Alignment Length:301 Identity:80/301 - (26%)
Similarity:114/301 - (37%) Gaps:61/301 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TQIKSESPLNPLQVQTGQTSLPVGGCGGAGVVGGVGGVGVSVGQPGIGQ-QGVPPVPSVLMVNKM 78
            :|.::.|..|..|.|:.         |||.|......|..|......|. ...|..|..:...:.
Mosquito   137 SQTQNTSSSNASQQQSS---------GGAVVSPATQIVPPSAASESPGSVSSQPSGPIHIPAKRP 192

  Fly    79 TPNCDKR-----------SADTAY--------WMTASEGGFINSQPSMAEFLNHLSPESPKIGTP 124
            ..:.|.|           :||.||        ..|..:..:..|.|:.|.|..|  |..||    
Mosquito   193 AFDTDTRLRHSYPWGNDSAADYAYHAQYPPYALATDIKPMYYPSYPTEANFQPH--PYYPK---- 251

  Fly   125 VGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQ----GD 185
                      ...:..:........||....|....|...|.....:..|.::..|...    |.
Mosquito   252 ----------YEPDAYITASTERSRGVTGDQPSLQSSYESYNSSGLRSYSSETYPNPGSSLSVGV 306

  Fly   186 NSITEFVPENGLP-------RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVK 243
            :.:....|.|.|.       |:.|..|:..|.|||||||.||.|:.:.:|.|:|.:|:|||||||
Mosquito   307 SGVGSCTPSNPLEWTGNVTVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLNLTERQVK 371

  Fly   244 VWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSK 284
            :||||||||:|     |.....:..:..|..:.|.|:|:|:
Mosquito   372 IWFQNRRMKNK-----KNSQRQSAQANSGSSNNSSSHSHSQ 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 33/55 (60%)
LOC1272715XP_061500303.1 None

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