DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and DBX1

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_001025036.2 Gene:DBX1 / 120237 HGNCID:33185 Length:343 Species:Homo sapiens


Alignment Length:396 Identity:93/396 - (23%)
Similarity:128/396 - (32%) Gaps:154/396 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PLQVQTGQTSLPVGGCGGAGVVGGVGGVGVS-VGQPGIGQQ--GVPPVPSVLMVNKMTPNCDKRS 86
            |..|.|...|.|..|...|     :...|.| :|.||.|.:  |.||                  
Human    55 PRSVPTASMSPPRQGAPTA-----LTDTGASDLGSPGPGSRRGGSPP------------------ 96

  Fly    87 ADTAYWMTASEGGFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGV 151
              ||: ..|||..|:.                              .|||..::.|         
Human    97 --TAF-SPASETTFLK------------------------------FGVNAILSSG--------- 119

  Fly   152 VPQT---PDGMDSVPE------------YPWMKEKKTSRKSSNNNNQGDNSITEFVP-------- 193
             |:|   |..:.|||.            .|:::.......||            .||        
Human   120 -PRTETSPALLQSVPPKTFAFPYFEGSFQPFIRSSYFPASSS------------VVPIPGTFSWP 171

  Fly   194 --ENGLPRR---LRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 253
              ..|.|||   .|..:::.|...|||.|...||:.:|.|.::||.|.|.:.|||:||||||||.
Human   172 LAARGKPRRGMLRRAVFSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRMKW 236

  Fly   254 KRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKK----SCQGCE---LPS--DDIPD-STSNSRGHN 308
            :                           |||:    |..||.   ||:  :..|| |....:|..
Human   237 R---------------------------NSKERELLSSGGCREQTLPTKLNPHPDLSDVGQKGPG 274

  Fly   309 NNTPSATNNNPS-----AGNLTPNSSLETGISSNLMGSTTVSASNVISADSSVASSVSLDEDIEE 368
            |........:||     ..:..|....:..:...|..|...|:|....:|.|.:..   :|:.||
Human   275 NEEEEEGPGSPSHRLAYHASSDPQHLRDPRLPGPLPPSPAHSSSPGKPSDFSDSEE---EEEGEE 336

  Fly   369 SSPIKV 374
            ...|.|
Human   337 QEEITV 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 27/58 (47%)
DBX1NP_001025036.2 PRK12323 <49..182 CDD:481241 41/204 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 56..100 17/69 (25%)
Homeodomain 184..238 CDD:459649 25/80 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..343 25/106 (24%)

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