Protein Alignment pb and nkx2-3

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_002937234.1
• Gene: nkx2-3 / 100486189
• XenbaseID: XB-GENE-852996
• Length: 328
• Species: Xenopus tropicalis
• Alignment Length: 233
• Identity: 62/233 - (26%)
• Similarity: 91/233 - (39%)
• Gaps: 57/233 - (24%)

  Fly   143 VGVGYPVGVVPQTPDGMDSV--PEYPWMKEKKTSRKSS------NNNNQGDNSITE-FVPENGLP 198
            :|...|.|.|..:||...::  |:....:|:.:.|:..      |.:..|:..:.: ..|:....
 Frog    82 MGAAEPHGDVGLSPDRYVALRDPKEEDEEEEDSLREGGNKSCFLNKSPDGEGKLEDPDRPKQRSR 146

  Fly   199 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDD 263
            |:.|..::..|:.|||:.|...:||..|.|..:|.||.||..|||:||||||.|.|||...|:.:
 Frog   147 RKPRVLFSQAQVFELERRFKQQRYLSAPEREHLANSLKLTSTQVKIWFQNRRYKCKRQRQDKSLE 211

  Fly   264 ------------------EDNKDSLKGDDD-------------------QSDSNSNSKKSCQGCE 291
                              .|.|..:.|...                   .|.:||.|..:...|.
 Frog   212 MGTHHPPPPRRVAVPVLVRDGKPCIGGSQSYNTAYNVTASPYSYNSYPAYSYNNSPSYNTNYNCN 276

  Fly   292 LPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNLTPNSS 329
            ..|  ||     |..||..|....|    .|||:..|:
 Frog   277 YAS--IP-----SNLHNTGTSPFVN----LGNLSQISN 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	26/55 (47%)
nkx2-3	XP_002937234.1	Homeodomain	147..203	CDD:459649	26/55 (47%)