Protein Alignment pb and hoxc3

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_002936696.1
• Gene: hoxc3 / 100190990
• XenbaseID: XB-GENE-5997986
• Length: 394
• Species: Xenopus tropicalis
• Alignment Length: 348
• Identity: 104/348 - (29%)
• Similarity: 141/348 - (40%)
• Gaps: 113/348 - (32%)

  Fly    34 SLPVGGCGGAGVVGGVGGVGVSVGQPGIGQQGVPPVPSVLMVNKMTPNCDKRSADTAYWMTASEG 98
            |...||||    ..|..|:|.      :|||..|...     :...|.|  ...|||....:.:|
 Frog    12 SASFGGCG----FQGNNGMGY------LGQQDYPSED-----DYQPPFC--LPPDTANGSASHKG 59

  Fly    99 GFINSQPSMAEFLNHLS--------PESPKIGTPVGSGA----------IGGVGVNVNVNVGVGV 145
                 :.|:.....|||        |:||...:|:...|          .|.|..:|
 Frog    60 -----EHSIKGIDFHLSEVSEQAQQPKSPNSDSPLPKSASTQSCTSKKSTGPVSSDV-------- 111

  Fly   146 GYPVGVVPQTPDGMDSVPE--YPWMKEKKTSRKSSNNNNQG----------DNSITEFVPENGLP 198
                 ..|.......::|:  :|||||   :|::|....|.          |:|..     :...
 Frog   112 -----TSPNKKSKGSNMPKQIFPWMKE---TRQNSKQKKQAPPPADDAPAVDSSFL-----SSAS 163

  Fly   199 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDD 263
            :|.||||||:||:|||||||||:|||||||:|:|..|:|:|||:|:||||||||.|:       |
 Frog   164 KRARTAYTNSQLVELEKEFHFNRYLCRPRRLEMAKLLNLSERQIKIWFQNRRMKFKK-------D 221

  Fly   264 EDNKDSLKGDDDQSDSNSNSKKSCQGCELPSD-----DIPDSTSNSRGHNNNTPSATNNNPSAGN 323
            ...|.........|.|:|.|.....| .||.|     ::|.:|           .|.|.:|
 Frog   222 HKGKGGGGSPGGLSPSSSPSLMPYSG-NLPLDGDCGYEVPMAT-----------GAYNKSP---- 270

  Fly   324 LTPNSSLETGISSNLMGSTTVSA 346
                        .|:.|.|..||
 Frog   271 ------------GNMYGLTAYSA 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	41/55 (75%)
hoxc3	XP_002936696.1	Homeodomain	164..220	CDD:459649	41/55 (75%)
		DUF4074	335..392	CDD:463833