DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neurochondrin and AT4G32050

DIOPT Version :10

Sequence 1:NP_649658.1 Gene:Neurochondrin / 40796 FlyBaseID:FBgn0037447 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_194933.2 Gene:AT4G32050 / 829336 AraportID:AT4G32050 Length:618 Species:Arabidopsis thaliana


Alignment Length:601 Identity:139/601 - (23%)
Similarity:251/601 - (41%) Gaps:130/601 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTDVPEPVRK-----CASLLKGTKSDTEKFAALFMVTKLVKGKDCNAAGKKLLFEAIGFPFLKKL 60
            |...|:..|.     |..||||.: |.::.|.|.:|||..|..|..:..|  ::||:|..||.:|
plant     1 MAAAPQEERSPSLDDCLKLLKGER-DEQRLAGLLLVTKFCKNDDIVSLNK--VYEAVGTHFLDRL 62

  Fly    61 ----------LVSKDLPNDCPPLVYKSVALSILTCFCQEEELATHKDIIDAIPTLLEIVEQADD- 114
                      :.::|        ||..:::::|..||:..|:|:.::::..||.:||::.:... 
plant    63 FRTGSGSGDGVDNRD--------VYLQISITVLAAFCRVPEIASSEEMVSRIPLILEVMSKGITT 119

  Fly   115 ---EDYEDNLIVVSEAYSCLKSIASHEPGQQALLATGAI----PKMSQIYSAQSFQTDEALHLIV 172
               ||..:.|.:||.|  |       |.|...|:.:|.:    |:||::... |...:.|:.::.
plant   120 NMLEDCYELLYLVSTA--C-------EAGLMTLINSGGLRVIAPQMSELPDG-SHAMEVAIKILQ 174

  Fly   173 LLVKQFGVVSWP-EDPTAFHALIQRIALDMETDDTERKYELCRILADILITCRREIV---INSLE 233
            |||.:....|.. |.......:|..:|..........|:|...:|:.:..:...|::   :.|:.
plant   175 LLVSKLDCGSMTIERFLELSLVIAAVARQFAVLHNALKFEALHLLSAVFSSEYSELLHEPLRSMP 239

  Fly   234 GQIWPESLFKGCGDILKAKIGPKQRDPALHLIATTLHVLGIQWAF-------MD-EQKTFFLQLL 290
            ...|.:.:..|...||:.::.|.::..||.|....:.:||.:|..       :| ......|.:|
plant   240 DNNWADYMRTGVVAILQNRVAPSEKLHALILAENMMSILGEKWLLGGVKLPNVDIPADRCLLLVL 304

  Fly   291 QLGAIEVRMQMDE---KKLET----------TFKQAELLTCCFSILEHCIEYMATDQLDLEPKEK 342
            :...:|:.:.:::   ||.|.          ..|| ..|...||::|..|:|:::      ..|.
plant   305 ESSHVEISVLLNDLAYKKYEAPKDNSTAEDILLKQ-RYLPIVFSLVEKIIKYISS------AGEN 362

  Fly   343 QTTYTALKGAFNQVLAVLTRVSQ---DKIRESSNPKDKK--FVFAIVKVLSAWLAQETTAMRPAI 402
            :.|.:. :..|.:|:.:|.....   :.:|::.....||  .:.|.|:|:.::||:...|.:..:
plant   363 EGTLSD-EAVFQKVIKILNETVGAVFEYLRDAKEHGIKKGTDLLASVRVIGSYLAETPVACKEQV 426

  Fly   403 YKLLPFMLKVANESFQELKTWRAGTREGEPPIDVLRIMLPALCHFAVEEEARRVLFTHKQDEVLL 467
            ..||.:||.|..|.            |..|.:... .:||.||...:..|..::|...:.|..::
plant   427 QDLLDYMLSVKGED------------ESSPFLSTC-FLLPMLCQITMNAEGCKLLAYSRGDVAVV 478

  Fly   468 ESLEFYFSIAHWKRPPIPRAERLKRMNEPDPVPTPEQQAEMKVARSAIVALCNILMNFTVLEPKK 532
            |.|             |...||.....:.|              ||..:| |:.:||..:   |:
plant   479 ECL-------------IKLIERCGESVDED--------------RSIFLA-CDTIMNILL---KR 512

  Fly   533 AEDGP----TFANLLK 544
            .|..|    |||:|||
plant   513 EEISPPEISTFASLLK 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NeurochondrinNP_649658.1 Neurochondrin 2..631 CDD:336138 138/600 (23%)
AT4G32050NP_194933.2 Neurochondrin 7..559 CDD:336138 137/595 (23%)

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