DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zif and CG17612

DIOPT Version :10

Sequence 1:NP_649657.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster


Alignment Length:415 Identity:86/415 - (20%)
Similarity:149/415 - (35%) Gaps:96/415 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TCRVCLAQSERLQRL-DEIREEGEESPNEMLIQLLGVSYSNLNDREHIPDGICKSCKVELNMAYQ 72
            :|||||.||:.|..: |:..:.|..... :|.|..|:.   :...:...:.||.:|...:..|:.
  Fly   186 SCRVCLEQSDNLTNIFDDAHQYGIPIAT-ILSQYTGMP---VEKGDSFSEYICVTCLDVVKNAFD 246

  Fly    73 FREKALRKQMEIEEYCRELGLLDESDVMMIKEEDGSQQ----------QCDEEMYILEETTTGEE 127
            ..|.   |:..|:.|.:....:.:.|.:.:|.:....:          ||.:...:..:......
  Fly   247 DLES---KENTIQMYRQPKEEIIDIDSIPVKNKPVDYEVTGKPPHRCPQCPKIFLLAAKLQAHIR 308

  Fly   128 EHQEEKGHEE-----------YLEVDTSDQQECIGDTIEYLEDNYTIEMNSDQTEIVLESEKQYE 181
            .|.|.:..|.           |:      ::.|       ||.:..|...||:.|..||...:..
  Fly   309 THNETRTTEPPRLKCPMCPSIYM------KRGC-------LEAHMWIHRASDERESELEPPYRCP 360

  Fly   182 ETP-----SQQLALQEAAKASLKARRGRVRRGLNSLTTSDGTEKGGYICDVCGNFYEKRGRMMEH 241
            ..|     |..|.:.......:..|..|               |..:.|..|.:.:.....:.:|
  Fly   361 HCPKLFLYSSFLEIHIQTHEDVSQRLSR---------------KSSHKCAQCADVFSDVSSLKDH 410

  Fly   242 RRRHDGICQYACELCDAKFQVREQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKSH-ENVHRGIK 305
            .:.|.|...:.|.||...||....|:.|..:||   .:||..||:.|..::.|..| :..|....
  Fly   411 VKIHAGERTFKCPLCLMSFQEESNLKSHDCAHT---RFKCHKCSKFFESQNYLDFHFKKSHTTKG 472

  Fly   306 PYVCKVCDKAFAYAHSLTKHELIHSDI-----------KLYRCDYCNKDFRL-----LHH----- 349
            |:.|..|.:.|...:.|.:|  |.|.:           :::.|..|.|.|.:     :||     
  Fly   473 PFKCIKCQQTFQKRNGLKEH--ISSQVCVQFLRSKSPGQIFPCPKCPKKFSIEDNYQMHHATHKK 535

  Fly   350 ----MRQHEET---KLHQNAVMLAE 367
                :.:|..|   |.:||..:|.:
  Fly   536 VKTVIERHNCTQCKKSYQNKKLLTK 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZifNP_649657.1 zf-AD 9..87 CDD:462262 20/78 (26%)
C2H2 Zn finger 225..245 CDD:275368 3/19 (16%)
COG5048 <250..369 CDD:227381 37/147 (25%)
C2H2 Zn finger 253..273 CDD:275368 7/19 (37%)
C2H2 Zn finger 281..301 CDD:275368 6/20 (30%)
C2H2 Zn finger 309..329 CDD:275368 5/19 (26%)
C2H2 Zn finger 337..353 CDD:275368 6/29 (21%)
CG17612NP_608824.1 zf-AD 187..>246 CDD:462262 17/62 (27%)
C2H2 Zn finger 290..310 CDD:275368 2/19 (11%)
C2H2 Zn finger 323..343 CDD:275370 4/32 (13%)
C2H2 Zn finger 359..379 CDD:275368 3/19 (16%)
C2H2 Zn finger 394..414 CDD:275368 3/19 (16%)
C2H2 Zn finger 422..438 CDD:275368 6/15 (40%)
C2H2 Zn finger 447..463 CDD:275368 5/15 (33%)
C2H2 Zn finger 476..505 CDD:275368 7/30 (23%)
C2H2 Zn finger 513..533 CDD:275368 6/19 (32%)
C2H2 Zn finger 545..565 CDD:275368 5/16 (31%)
C2H2 Zn finger 568..584 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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