DRSC/TRiP Functional Genomics Resources

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Protein Alignment gpp and dot-1.3

DIOPT Version :9

Sequence 1:NP_731085.2 Gene:gpp / 40793 FlyBaseID:FBgn0264495 Length:2137 Species:Drosophila melanogaster
Sequence 2:NP_001333541.1 Gene:dot-1.3 / 189244 WormBaseID:WBGene00012302 Length:313 Species:Caenorhabditis elegans


Alignment Length:330 Identity:85/330 - (25%)
Similarity:136/330 - (41%) Gaps:64/330 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 GHGQDKHDNGIDIIDTIKFVCDEL----------PSMSSAFEETNLHQIDTACYKTMTGLVDRFN 84
            |:.:.|..|.:....|:|.:.:|:          |..|.|                :.|..|:|:
 Worm    12 GNAEFKFPNTLHFRQTVKEMFEEIYKPILDAVKVPLPSDA----------------VVGNPDKFS 60

  Fly    85 KAVDSIVALEKGTSLPAERLN-KFAHPSLL-----RH----------------ILQLVYNAAVLD 127
            :.:|:              || |.|||.:|     :|                :.:|.|..:|.|
 Worm    61 QYIDA--------------LNLKLAHPDVLSRVPAKHHEITSTRLCSLTVAIKLAELAYRFSVPD 111

  Fly   128 PDKLNQYEPFSPEVYGETSYELVQQMLKHVTVSKEDTFIDLGSGVGQVVLQMAGSFPLKTCIGIE 192
            .:.|..|...:..||||.....:...:..:.:...|.|:|||||:|.:|..:|.....:..:|:|
 Worm   112 ANVLRHYAVGTSTVYGELHCSQMASFVDQLNMGPSDYFMDLGSGIGHLVNFVAAYARTQMSVGVE 176

  Fly   193 KADTPARYAERMDVIFRQYMGWFGKRFCEYKLIKGDFLVDE-HRENITSSTLVFVNNFAFGPTVD 256
            ..|..|..||:......:.:..|||:....:.|.|.|.... .||..|.:|::..||..|.|.:.
 Worm   177 LMDNLAEIAEKNKEFNERLLNHFGKKVYATRFIHGSFTSPAVIREIQTKATVILANNVRFDPELK 241

  Fly   257 HQLKERFADLRDGARVVSSKSFCPLNFRITD-RNLSDIGTIMHVSEIPPLKGSVSWTCKPVSYYL 320
            .||||.....:|..|::||:...|...|.|: |...|...|...|.:..:..:||||.:.|.:||
 Worm   242 LQLKEILMGCKDRTRIISSEPLVPSRARQTNSRRADDFVKISDESLLNLVDNNVSWTSRKVPFYL 306

  Fly   321 HVIDR 325
            ..|:|
 Worm   307 TTINR 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gppNP_731085.2 DOT1 121..323 CDD:149273 61/203 (30%)
dot-1.3NP_001333541.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156806
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3924
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5493
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D55132at33208
OrthoFinder 1 1.000 - - FOG0003132
OrthoInspector 1 1.000 - - otm14488
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21451
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.800

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