DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18048 and trmt13

DIOPT Version :10

Sequence 1:NP_649646.3 Gene:CG18048 / 40782 FlyBaseID:FBgn0037435 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001014331.1 Gene:trmt13 / 541496 ZFINID:ZDB-GENE-050327-19 Length:457 Species:Danio rerio


Alignment Length:471 Identity:166/471 - (35%)
Similarity:247/471 - (52%) Gaps:69/471 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TTVKAEKPVTTTCSYWVLRKKRRCKMTANKGSEFCGAHASSAATTATCDEKAREDSFQERIPCPL 73
            :|.....|:...|:::|::|||.|||....|..|||.||:           |.|:..::||||||
Zfish     4 STADGAAPLPGRCAFYVVKKKRYCKMIVGSGKTFCGEHAN-----------AGEEGERKRIPCPL 57

  Fly    74 DHKHTVFKRKLAKHLTICNARDQESSLPYIVKGVNSGDNLKETDEDLNKFNQIKLHELADEEFYS 138
            |:|||||:..|.|||..||::::...: |.||.:|:|  ....||.:   .:|.:.:...||...
Zfish    58 DNKHTVFEDNLTKHLKKCNSKEKPKPI-YYVKDINAG--CASEDETV---KEISIADRTKEELDD 116

  Fly   139 LIDKVKNLYDKHINSSIQELQLEHESLKEELSRKDYGQETLRQLTQTTSLLGILEHDHQLMDHTS 203
            ||.|:||.. :.:|:.:.|..|.|.:|.|.|:....|....:.|.|..|:||.:|....|..:..
Zfish   117 LIVKLKNAL-QGLNTKLIENTLSHSALHESLNDPKNGDSAFKHLKQQASILGNMEALELLSPNRC 180

  Fly   204 YIEFGAGKGQLAYFLATVLQEQKLSHSQVVLIDRMSLRHKKDNKLANRE-VVQRIRADIADLKLS 267
            |||||||||:|::::...|:..:..|  .:|::|.|.|.|.|.|..|.: ...|::.||..|.|.
Zfish   181 YIEFGAGKGKLSHWIHIALKSAENVH--FLLVERSSTRFKVDGKHKNADSTFDRLQVDIQHLDLR 243

  Fly   268 ALPELK-KTQRTVAFSKHLCGAATDLTLRCIL--------------------GDGNASSDY---- 307
            .:|.|: |....:...||||||||||.|||:.                    .:|....|.    
Zfish   244 KVPLLREKGLPVIGVGKHLCGAATDLALRCLFEHNCTSKDDEPPFKRVKLNQAEGAGGKDMKPVP 308

  Fly   308 ---------------VLIALCCHHRCSWRSYVGRKFLQEAGIGPREFVILTKMVSWAVCG----- 352
                           :.|||||||||.||.|||::|.:|.|:||.||....:|.|||.||     
Zfish   309 STEGRETGKEIVVSGLAIALCCHHRCDWRHYVGKEFFRERGLGPEEFAAFQRMSSWATCGMRKAA 373

  Fly   353 ---TGLSRERRKAMESADFQLTETNTQRLTRQEREQIGQQCKRVLDYGRLEHLRSHGYQAELKFY 414
               :...|:..|..|.:|..:.:|....::.::|||||:.|||::|:||:.:|:..|::..:|:|
Zfish   374 ETTSEHKRDEEKEHEMSDEAVLDTLNGFMSVEDREQIGRLCKRLIDHGRVHYLQKKGFKTSMKYY 438

  Fly   415 VPRDVTLENVVLLARP 430
            ..|||:||||:|.|.|
Zfish   439 TSRDVSLENVLLAAIP 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18048NP_649646.3 zf-TRM13_CCCH 21..44 CDD:463331 10/22 (45%)
zf-U11-48K 68..92 CDD:461603 16/23 (70%)
TRM13 184..429 CDD:398743 104/293 (35%)
trmt13NP_001014331.1 zf-TRM13_CCCH 14..42 CDD:463331 12/27 (44%)
zf-U11-48K 52..76 CDD:461603 16/23 (70%)
TRM13 160..452 CDD:398743 104/293 (35%)

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