DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17919 and AT5G01300

DIOPT Version :10

Sequence 1:NP_649644.1 Gene:CG17919 / 40780 FlyBaseID:FBgn0037433 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_195750.1 Gene:AT5G01300 / 830983 AraportID:AT5G01300 Length:162 Species:Arabidopsis thaliana


Alignment Length:168 Identity:40/168 - (23%)
Similarity:64/168 - (38%) Gaps:45/168 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 QLLKVTYSNN-------LVAKDGVELTPTQVKD-QPVVEWDAQPGEFYT--LIMTDPDAPSRAEP 94
            :|:..|..|:       .:|..||:      || .|.:||...|....|  |::.|.|||..:.|
plant     7 RLVSPTIDNDGKLPRKYTMAGQGVK------KDISPPLEWYNVPEGTKTLALVVEDIDAPDPSGP 65

  Fly    95 KFREFKHWILANI-----------AGND-----LASGEPIAEYIG-SGPPQGTGLHRYVFLLYKQ 142
             ...:..|::.:|           :||:     :..|....:..| .||...:..||:.|.|:..
plant    66 -LVPWTVWVVVDIPPEMKGLPEGYSGNEDQTTGIREGNNDHKIPGWRGPLLPSHGHRFQFKLFAL 129

  Fly   143 SGKLEFDEERVSKRSRKDRPKFSAAKFAI-NHELGNPI 179
            .     |:.::.....|:|     ...|| .|.||..|
plant   130 D-----DKPKIGHTVTKER-----LLIAIEGHVLGEAI 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17919NP_649644.1 PEBP_euk 41..186 CDD:176644 40/167 (24%)
AT5G01300NP_195750.1 PEBP 6..159 CDD:441485 40/168 (24%)

Return to query results.
Submit another query.