DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17919 and Pebp4

DIOPT Version :10

Sequence 1:NP_649644.1 Gene:CG17919 / 40780 FlyBaseID:FBgn0037433 Length:202 Species:Drosophila melanogaster
Sequence 2:XP_008769058.2 Gene:Pebp4 / 691997 RGDID:1593295 Length:235 Species:Rattus norvegicus


Alignment Length:132 Identity:45/132 - (34%)
Similarity:72/132 - (54%) Gaps:9/132 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 PVVEW-DAQPGEFYTLIMTDPDAPSRAEPKFREFKHWILANIAGNDLAS----GEPIAEYIGSGP 126
            |:|:: .|..|..|.|:|.|||||||:.|:.:.::||:::||.|.|:.|    |..|.:|....|
  Rat    92 PIVKFHGALDGAQYLLVMVDPDAPSRSNPRMKYWRHWVVSNITGTDMKSGSIRGNIITDYQPPTP 156

  Fly   127 PQGTGLHRYVFLLYKQSGKLEFDEERVSKRSRKDRPKFSAAKFAINHELGNPIAGTFYQAQYDDY 191
            |..||||||.|.:|.|..:    :..:.:...::|..:...||...:.|.:|...|.:..|:|..
  Rat   157 PPTTGLHRYQFFVYLQGDR----DISIPESENENRGAWKLDKFLQQYGLQDPDTSTQFMTQFDGE 217

  Fly   192 VP 193
            :|
  Rat   218 LP 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17919NP_649644.1 PEBP_euk 41..186 CDD:176644 42/123 (34%)
Pebp4XP_008769058.2 PEBP_euk 60..212 CDD:176644 42/123 (34%)

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