DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17919 and PEBP1

DIOPT Version :10

Sequence 1:NP_649644.1 Gene:CG17919 / 40780 FlyBaseID:FBgn0037433 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_002558.1 Gene:PEBP1 / 5037 HGNCID:8630 Length:187 Species:Homo sapiens


Alignment Length:169 Identity:88/169 - (52%)
Similarity:122/169 - (72%) Gaps:2/169 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IPEPPNQLLKVTYSNNLVAKDGVELTPTQVKDQPV-VEWDA-QPGEFYTLIMTDPDAPSRAEPKF 96
            :.|.|...|.|||:...|.:.|..|||||||::|. :.||. ..|:.|||::||||||||.:||:
Human    17 VDEQPQHPLHVTYAGAAVDELGKVLTPTQVKNRPTSISWDGLDSGKLYTLVLTDPDAPSRKDPKY 81

  Fly    97 REFKHWILANIAGNDLASGEPIAEYIGSGPPQGTGLHRYVFLLYKQSGKLEFDEERVSKRSRKDR 161
            ||:.|:::.|:.|||::||..:::|:|||||:||||||||:|:|:|...|:.||..:|.||...|
Human    82 REWHHFLVVNMKGNDISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQDRPLKCDEPILSNRSGDHR 146

  Fly   162 PKFSAAKFAINHELGNPIAGTFYQAQYDDYVPKLHKQLS 200
            .||..|.|...:||..|:|||.|||::|||||||::|||
Human   147 GKFKVASFRKKYELRAPVAGTCYQAEWDDYVPKLYEQLS 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17919NP_649644.1 PEBP_euk 41..186 CDD:176644 74/146 (51%)
PEBP1NP_002558.1 PEBP_euk 23..171 CDD:176644 74/147 (50%)
Interaction with RAF1. /evidence=ECO:0000269|PubMed:18294816 93..134 23/40 (58%)

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